STracking
Contents:
Introduction
Install
Quick start
Guide
Example 1: Stracking workflow
Example 2: StarDist (Detection) + Stracking (Tracker)
Available tools
STracking
Index
Index
C
|
D
|
E
|
F
|
G
|
I
|
L
|
M
|
P
|
R
|
S
|
T
|
W
C
CSVIO (class in stracking.io)
D
data (stracking.containers.SParticles attribute)
(stracking.containers.STracks attribute)
DisplacementFeature (class in stracking.features)
DistanceFeature (class in stracking.features)
DoGDetector (class in stracking.detectors)
DoHDetector (class in stracking.detectors)
E
EuclideanCost (class in stracking.linkers)
F
FeatureFilter (class in stracking.filters)
features (stracking.containers.STracks attribute)
G
graph (stracking.containers.STracks attribute)
I
ICYIO (class in stracking.io)
IntensityProperty (class in stracking.properties)
is_compatible() (stracking.io.CSVIO method)
(stracking.io.ICYIO method)
(stracking.io.ISBIIO method)
(stracking.io.StIO method)
(stracking.io.TrackMateIO method)
ISBIIO (class in stracking.io)
L
LengthFeature (class in stracking.features)
LoGDetector (class in stracking.detectors)
M
module
stracking.containers
stracking.detectors
stracking.features
stracking.filters
stracking.io
stracking.linkers
stracking.properties
P
properties (stracking.containers.SParticles attribute)
(stracking.containers.STracks attribute)
R
read() (stracking.io.CSVIO method)
(stracking.io.ICYIO method)
(stracking.io.ISBIIO method)
(stracking.io.StIO method)
(stracking.io.TrackMateIO method)
read_particles() (in module stracking.io)
read_tracks() (in module stracking.io)
run() (stracking.detectors.DoGDetector method)
(stracking.detectors.DoHDetector method)
(stracking.detectors.LoGDetector method)
(stracking.detectors.SDetector method)
(stracking.detectors.SSegDetector method)
(stracking.features.DisplacementFeature method)
(stracking.features.DistanceFeature method)
(stracking.features.LengthFeature method)
(stracking.features.SFeature method)
(stracking.filters.FeatureFilter method)
(stracking.filters.STracksFilter method)
(stracking.linkers.EuclideanCost method)
(stracking.linkers.SLinker method)
(stracking.linkers.SLinkerCost method)
(stracking.linkers.SNNLinker method)
(stracking.linkers.SPLinker method)
(stracking.properties.IntensityProperty method)
(stracking.properties.SProperty method)
S
scale (stracking.containers.SParticles attribute)
(stracking.containers.STracks attribute)
SDetector (class in stracking.detectors)
SFeature (class in stracking.features)
SLinker (class in stracking.linkers)
SLinkerCost (class in stracking.linkers)
SNNLinker (class in stracking.linkers)
SParticles (class in stracking.containers)
SPLinker (class in stracking.linkers)
SProperty (class in stracking.properties)
SSegDetector (class in stracking.detectors)
StIO (class in stracking.io)
stracking.containers
module
stracking.detectors
module
stracking.features
module
stracking.filters
module
stracking.io
module
stracking.linkers
module
stracking.properties
module
STracks (class in stracking.containers)
STracksFilter (class in stracking.filters)
T
TrackMateIO (class in stracking.io)
W
write() (stracking.io.CSVIO method)
(stracking.io.ICYIO method)
(stracking.io.ISBIIO method)
(stracking.io.StIO method)
(stracking.io.TrackMateIO method)
write_particles() (in module stracking.io)
write_tracks() (in module stracking.io)